Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNKVPASFNKWIEKVKTTFPENEKLHRMFEKCFTNTYTTTLQETEEGLPFVITGDIPAMWLRDSTSQIRPYLIVAEEDEEMATVIENLVKLQTKCILHDPYANAFNKSAN-GAGFQNDKTAMTNLVWERKYEIDSLCYPIQLAYLLWKSTNRTGHFTEEFRKALHQIIEVFKIEQKHTEQSPYRFERENVRQSDTLNNNGKGTDVSYTGMSWSGFRPSDDACMYGYLVPSNMFLVVVMDYVQEIAATFYPEDK---ELPKESSDLRKEVAAGIETYAKQVHPYYGDVYAYEVDGTGRKLFMDDANVPSLLAATYLGFCEKTDPAYQATRKLILSRENPYFVEGSVLTGIGSPHTPDHYVWPIALSIEGLTAETEAEKQAILEMLIAGDGGTDYMHEGVNASNPAEFTRDWFAWSNAMFSEFVLSLCGVYVKGSPLSK |
| 3QRY Chain:B ((2-425)) | --VYSKEIVREWLDEVAERAKDYPEWVDVFERCYTDTLDNTVEILEDGSTFVLTGDIPAMWLRDSTAQLRPYLHVAKRDALLRQTIAGLVKRQMTLVLKDPYANSFNIEENWKGHHETDHTDLNGWIWERKYEVDSLCYPLQLAYLLWKETGETSQFDEIFVAATKEILHLWTVEQDH-KNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALN--LADSQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLGNASIMDDPNVPSLLAAPYLGYCSVDDEVYQATRRTILSSENPYFYQGEYASGLGSSHTFYRYIWPIALSIQGLTTRDKAEKKFLLDQLVACDGGTGVMHESFHVDDPTLYSREWFSWANMMFCELVLDYLDI--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QRY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198283 for 3815 contacts (-52.0/contact) +
2D Compatibility (PS) -45113 + (NN) -28532 + (LL) 496
1D Compatibility (HY) -43600 + (ID) 10250
Total energy: -325282.0 ( -85.26 by residue)
QMean score : 0.479
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