Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVQSLAKQVIHQAVEVNAQDIYIIPKGDCYELYMRIDDERRFIDVFEFNRMAS--LISHFKFVAGMNVGEKRRSQLGSCDYELSEGRLVSLRLSSVGDYRGQESLVIRILYSGHQDLKYW--------FDNIKQMKEVLGTRGLYLFSGPVGSGKTTLMYQLASEVFKN-KQIITIEDPVEIKNDKMLQLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSISGVYDRLIELGVNYQELENSLKLIAYQRLIGGGSLIDFETGNFKKHSSDKWNRQVDILAEEGHISKKQAQVEKIIPQETTESSPTF |
| 4PHT Chain:B ((123-390)) | ----LINAMLGEAIKEGASDIHIETFEKILSIRFRVDGVLR--DVLSPSRKLAPLLVSRVKVMAKLDIAEKRVPQDGRISL------AVDVRVSTMPSSHG-ERVVMRLLDKNATRLDLHSLGMTPVNHDNFRHL--ISRPHGIILVTGPTGSGKSTTLYAGLQELNSNERNILTVEDPIEFDIDGIGQTQVNPKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAITRLRDMGIEPFLISSSLLGVLAQRLVRTLCQDCKEPYEADKEQRKLFDALTLYRAKGCEKCNHKGYRGRTGIHELLMVDDKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179088 for 1892 contacts (-94.7/contact) +
2D Compatibility (PS) -26708 + (NN) -8218 + (LL) 1400
1D Compatibility (HY) -18400 + (ID) 4250
Total energy: -235264.0 ( -124.35 by residue)
QMean score : 0.542
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