Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFTYNREHVGDTLMVIVKDSQGAKLDVDRRGQVARVYLQDSKETVAWNIFEVSSLIVIEGAGQITLSDQDIKILNAELLKEGFEDS-L-VN-NIEPTFVVAQIKEMIDHPDSDHLHICQVEINDGKTVQIVCGAPNASVGLKTVAALPGAMMPN-GSLIFPGKLRGEDSFGMLCSARELALPNAPQVRGIIELSD-QVIVGESFDANKHWKN
1B7Y Chain:B ((11-149))
---------------------------------------------------------------YVPE-LESPEVLEERLAGLGFETDRIERVFPIPRGVVFARVLEAHPIPG-TRLKRLVLDAG--RTVEVVSGAENARKGIGVALALPGTELPGLGQKVGERVIQGVRSFGMALSPRELGVGEY--GGGLLEFPEDALPPGTPLSEAWPEEV
General information:
TITO was launched using:
RESULT:
Template:
1B7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85311 for 939 contacts (-90.9/contact) +
2D Compatibility (PS) -14784 + (NN) -10359 + (LL) 4780
1D Compatibility (HY) -5600 + (ID) 1850
Total energy: -113124.0 ( -120.47 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_1B7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B7Y-query.scw
PDB file :
Tito_Scwrl_1B7Y.pdb
: