Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKYIKADRFFYADHVKENGYLEIKDNHFGKWIENISGQEEILDYSGYQIAPGLVDTHIHGFAGADVMD-CDSEGILRMSAGLLSTGVTSFLPTTLTSDTKRLEEASKSVAAVAGKEQGAKIQGIYFEGPYFTEEYKGAQNPIYMRNPNLEEFAQWQKAAKGLITKIALAPEREGVEEFVSAITKQGVTVALGHSNGTYKEAKKAVKAGASVWVHAYNGMRGLTHREPGMVGAVYNLPNTYAELICDGHHVDPVACDILMTQKGHNHVALITDCMAAGGAPDGDYMLGELPVVVSNGTARLKDGGNLAGSILKLKDGLKNVVEW-GIATPEEAVRMASYVPAVSVGIDNVCGQIKEGYAADFIVLDKHLDLVATYLDGEKRWQS
3IV8 Chain:D ((37-377))--------------------------------IESLPSEMNVVDLNGANLSPGFIDLQLNGCGGVMFNDEITAETIDTMHKANLKSGCTSFLPTLITSSDENMRQAIAAAREYQAKYPNQSL-GLHLEGPYLNVMKKGIHSVDFIR-PSDDTMIDTICANSDVIAKVTLAPENNK-PEHIEKLVKAGIVVSIGHTNATYSEARKSFESGITFATHLFNAMTPMVGREPGVVGAIYDTPEVYAGIIADGFHVDYANIRIAHKIKGEKLV-LVTDATAPAGA-EM-----------------------LGGSALTMIEAVQNTVEHVGIAL-DEALRMATLYPAKAIGVDEKLGRIKKGMIANLTVFDRDFNVKATVVNGQYEQN-


General information:
TITO was launched using:
RESULT:

Template: 3IV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160691 for 2830 contacts (-56.8/contact) +
2D Compatibility (PS) -34127 + (NN) -17313 + (LL) 2996
1D Compatibility (HY) -20800 + (ID) 5650
Total energy: -235585.0 ( -83.25 by residue)
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_3IV8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IV8-query.scw
PDB file : Tito_Scwrl_3IV8.pdb: