Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVI----HKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQIDKGNKSMPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN
2XI5 Chain:A ((1-184))
GMDYQEYQQFLARINTARD-----ACVAKDIDVDLLMARHDYFGRELCKSLNIEYRNDVPFIDIILDIRPEVDPLTIDAPHITPDNYLYIN-NVLYIIDYKVSVSNESSVITYDKYYELTRDISDRL--SIPIEIVIIRIDPVSRDLHINSDRFKELY----PTIVVDINF--NQFFDLKQLLYEKFGDDEEFLLKVA-----
General information:
TITO was launched using:
RESULT:
Template:
2XI5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31961 for 1257 contacts (-25.4/contact) +
2D Compatibility (PS) -18524 + (NN) -2315 + (LL) 1084
1D Compatibility (HY) -8400 + (ID) 950
Total energy: -61066.0 ( -48.58 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_2XI5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XI5-query.scw
PDB file :
Tito_Scwrl_2XI5.pdb
: