Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASIIYSPKDIFEQDFKVSMRGYDKKEVDVFLDDVIKDYENYLEQIEKLQMENRRLQQALDKKESEASNVRNSGTAMYNQKPIAQSATNFDILKRISRLEKEVFGRQIRE
2WUJ Chain:A ((3-52))
-----LTPNDIHNKTFTKSFRGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNE-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WUJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5490 for 227 contacts (-24.2/contact) +
2D Compatibility (PS) -5423 + (NN) -2788 + (LL) 4868
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -12633.0 ( -55.65 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_2WUJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WUJ-query.scw
PDB file :
Tito_Scwrl_2WUJ.pdb
: