Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MSKFDSQKIITPIMKFVNMRG-----IIALKDGMLAILPLTVVG--------------SLFLILGQLP-FKGLNQAIANVF---GPEWTEPFMQVYSG--TFAIMGLISCFAIAYAYAKNSSVEPLPAGVLSLSSFFILMKSSYIPVKGEAIA--DAISKVWFGGQGIIGAIIIGLVVGAIYTWFIQHHI-------VIKMPEQVPQAIAKQFEAMIPAFVIF---LLSMIVYLIAKVTTGGTFIEMIYDIIQVPLQGLTGSLYGAIGIAFFISFLWWFGVHGQSVVNGIVTAL---LLSNLDANKSLLAANRLTLDNGAHIV-----TQQFLDSFLILSGSGITFGLVIAMLFAAKSKQYKALGKVAAFPAIFNVNEPIVFGFPIVMNPVMFLPFILVPVLAALIVYGAIAVGFMQPFSGVTLPWSTPAIISGFMVGGWQGALVQIV--ILAISTAVYFPFFKIQDNITYKNECEMERG------------ |
| 1CT9 Chain:A ((1-516)) | ASIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEVILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITKKYALHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHFT-----VQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCKMEKHILRECFEAYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -368396 for 3569 contacts (-103.2/contact) +
2D Compatibility (PS) -43756 + (NN) 6514 + (LL) 752
1D Compatibility (HY) -4400 + (ID) 2350
Total energy: -411636.0 ( -115.34 by residue)
QMean score : 0.156
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