Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFENIIYGIDGNVATIMLNRPDISNGFNIPMCQEIIDAIRLVSENKDVMFLVIEAQGPIFSIGGDLKVMKAAVESDDISSLTKIAELVNQISYDLLQLEKPVVMCVDGAVAGAAANIALAADFVIASKKSKFIQAFVGVGLAPDAGGLLLLSKSIGITRAVQLALTGESLSAEKAEALGIVYKLCESDKIGKIKDQLLKRLSRHSINSYQAIKSLAWEAAFKDWEQYKKLELQLQESLAFKQDFKEGVRAHADRRRPNFLGK |
| 3P5M Chain:D ((13-255)) | ----------DGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGD----DT----------AGAADAANRVVRAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLAFGWTKRALAAATLAELEPVQAIEAEGQLALVETADFREGARAFRERRTPNFRGH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156445 for 2034 contacts (-76.9/contact) +
2D Compatibility (PS) -26592 + (NN) -9965 + (LL) 2184
1D Compatibility (HY) -6400 + (ID) 3900
Total energy: -201118.0 ( -98.88 by residue)
QMean score : 0.503
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