Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEFIANGRVASIPDDAVGRTANGHVSFKFEFVCDSSQQDQE-GK--GLPAFFHVQVYGK-QAEIMAQSLSKGLPILIKGEIIQRPYTNQQGQRRTFQYISPS----QHDGITFLESKEATKKRKQGRFTSQAVTSPTLAYSEPVDADEPF
3ULP Chain:A ((82-194))
LNKIMLIGRVGCEP--DIKILNGGDKVATFSLATNEFWRDRNTNELKSKTDWHRIVVYDQNIVDLIDKYLRKGRRVYVQGSLHTRKWHT--SQPKQITEIILSYNKGDL---IFLD-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ULP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56433 for 614 contacts (-91.9/contact) +
2D Compatibility (PS) -10930 + (NN) 561 + (LL) 1896
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -71056.0 ( -115.73 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_3ULP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ULP-query.scw
PDB file :
Tito_Scwrl_3ULP.pdb
: