Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNRFAQLKENFEKGSPKRRVPTSRPIAAQKAPESYNKKGRYPFSLHQDVRYDKLEALVAYHGAKSASDYLERLIVQEWEKMQRKLKNKEK
2K1O Chain:A ((21-62))
-------------------------------------KRNFSVTFYLSKEEH-DVLRRLADEEV-ESVNSFVKRHILKTIIYKKGTNQDSSI
General information:
TITO was launched using:
RESULT:
Template:
2K1O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5273 for 187 contacts (-28.2/contact) +
2D Compatibility (PS) -4622 + (NN) -1503 + (LL) 2208
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -11990.0 ( -64.12 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_2K1O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K1O-query.scw
PDB file :
Tito_Scwrl_2K1O.pdb
: