Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNSEKVLNLIGLAQRAGRLITGEELVIKAIQNQQVSLIFLANDAGPNLTKKVTDKSNYYKTEVSTVFSTLELSDALGK-PRKVVAVADAGFSKKMRTLMA
3V7Q Chain:B ((4-100))
---GMEWFPLLGLANRARKVVSGEDLVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAVLGRSIGKEARVVVAVTDQGFANKLISLL-
General information:
TITO was launched using:
RESULT:
Template:
3V7Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61940 for 757 contacts (-81.8/contact) +
2D Compatibility (PS) -10528 + (NN) -5624 + (LL) 192
1D Compatibility (HY) -10000 + (ID) 2200
Total energy: -90100.0 ( -119.02 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_3V7Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V7Q-query.scw
PDB file :
Tito_Scwrl_3V7Q.pdb
: