Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKFAKEYPTTVLLVSLTTLVFLLMQLTYGSQAESSQVIFQFGGIQGDYLKAYPTNLWRLISPIFVHIGWEHFLLNGLALYFVGQMGESIWGSLRFLILYILSGLMGNIFTLFFTPHVVAAGASTSLFGVFSAIAIAGYFGKNPYLKQ--VGK-SYQVMILLNLFFNIFTPGVSLAGHVGGLVGGVLVAIFLTKQNGSLLFKTWQSILALMIFIIVSISLIGLSLV
2XOV Chain:A ((1-180))
----ERAGPVTWVMMIACVVVFIAMQILGDQE------VMLWLAWPFDP--TLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSG-PWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVA-GWFDLFGMSMANGAHIAGLAVGLAMAFVDSLN-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146301 for 1464 contacts (-99.9/contact) +
2D Compatibility (PS) -17831 + (NN) -6090 + (LL) 4388
1D Compatibility (HY) -16800 + (ID) 1600
Total energy: -184234.0 ( -125.84 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_2XOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XOV-query.scw
PDB file :
Tito_Scwrl_2XOV.pdb
: