Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKEKMMSFMTIASIALLGSGVVCANDVADPVAGTTDVVVVPVSPQPTTPSEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSKEKTEEPVKSNDSEVIPEQPKSEEVKKAEENTGASTTETPKPVTKPVIETPIVTNTGYTVLGTQDGNVWVQTETGNVLKPAIAIGAVKQKDGTVALKTKDGKLEVLPSTGETKTILAILGGLAILGAIWVGWKENIKKYLTFLKKKSKK |
2KV9 Chain:B ((720-735)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIHDRKEFAKFEEERA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4626 for 58 contacts (79.8/contact) +
2D Compatibility (PS) -1675 + (NN) -1625 + (LL) 12280
1D Compatibility (HY) 400 + (ID) 50
Total energy: 13956.0 ( 240.62 by residue)
QMean score : 0.484
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