Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLIIGIFSLIIIAILAWQGFSFLKHKEIKLQQAVVEKEIRIAEKTVEVVKRQKTERVLFLEPKGYDKSLSADILKWNQKSFEHKKFYDNQYIILRPQLADSNFANVKKLSIYQILYQKEKGSMFQKSSRLLRTYLLDQNKKPFELDELLAHNISGFKAILENIAPGTQLKEHDSNKEFLKTGRVTDGLDVKDGKLIINDLKLPLDKLYNVIDESYLKSSDLDLVSNLKAKAPRVALTFDDGPNEKTTPKALEILKRYNAKATFFVMGQSAVGHTDILQRMHAEGHEIGNHTWDHPNLTKLPAEKIKEEIHKTNDLIMKATGQKPVYLRPPYGATNATVKTVT---GLKEMLWSVDTEDWKNHNTQAMMTNIKKQLRPGGVILMHDIHQTSIDALPTIMDYLITQGYYFVTVGELYSTP |
2CC0 Chain:B ((7-176)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VGLTFDDGPS-GSTQSLLNALRQNGLRATMFNQGQYAAQNPSLVRAQVDAGMWVANHSYTHPHMTQLGQAQMDSEISRTQQAIAGAGGGTPKLFRPPYGETNATLRSVEAKYGLTEVIWDVDSQDWNNASTDAIVQAVSR-LGNGQVILMHDWPANTLAAIPRIAQTLAGKGLCSGMISPQTGRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63408 for 1407 contacts (-45.1/contact) +
2D Compatibility (PS) -17949 + (NN) -9406 + (LL) 18616
1D Compatibility (HY) -11200 + (ID) 3250
Total energy: -86597.0 ( -61.55 by residue)
QMean score : 0.423
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