Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSVLDYGLIDYGKTASDAIQETILLSQEAERLGYHQFWVAEHHGVKAFSISNPELMIMHLANQTKSIKIGSGGIMPLHYSSFKLAETLKTLETCHPNRVSIGLGNSLGTVKVSNALRSLH-K-AHDYEEVLEELKSWLIDK-SSSKE------PL-VQPTLS--SFPDLYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAKKLSSLYYHQFEEYYPNKS-PNLMVAAFVVIADTSEEAENIAKTLDIWMLGN-KDF---NEFATFPTIEEANHYQLTPEQKAKIKSNRHRMIVGDPKQVKDSLDALVNASQAEELLLIPLV-PGLDQRIKSLKLLSQLY |
| 1LUC Chain:A ((1-347)) | MKFGNFLLTYQPPELSQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEFGLLGNPYVAAAHLLGATETLNVGTAAIVLPTAHPVRQAEDVNLLDQMSKGRFRFGICRGLYDK-DFRVFGTDMDNSRALMDCWYDLMKEGFNEGYIAADNEHIKFPKIQLNPSAYTQGGAPVYVVAESASTTEWAAERGLPMILSWII--NTH---EKKAQLDLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAKDICRNFLGHWYDSYVNATKIF----------------------RIDYSYEINPVGTPEECIAIIQQDIDATGIDNICCGFEANGSEEEIIASMKLFQSDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142358 for 2497 contacts (-57.0/contact) +
2D Compatibility (PS) -32724 + (NN) -14529 + (LL) 2220
1D Compatibility (HY) -11600 + (ID) 2350
Total energy: -201341.0 ( -80.63 by residue)
QMean score : 0.590
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