Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MMDFYIKQI-------------IIHQF---SPNDTELVLSDTPLTLTPRIDD----YFRKKLSKVFSDEA--KRGYFGEDNVFMSHLQ------------DDLYVSSCQIAQLW-------KEEFVISEDQKTN--------------------DLVFIQFDKDGMEHFAFLRISLKEQFAHVSENQEQPITI-----------------------TQNNLPSAAQTPDEALVVNKSS-------KQYYLIEKRIKH-NGSFANYFSENLLQVQPEQSVKKSIKMVEQTAQKIAENFNKDDFSFQSKMKSAIYKNLEEEQELSPEKLADQLFD-DNLTARLT-FVDELKDAIPGPVQVSDIDHSR----QIKKLENQKLSLSNGIELIV-----PNNVYQDAESVEFIQNPDGTY----------SILIKN--IQDIQNK----------------- |
| 4CI7 Chain:A ((4-470)) | GSHKTLDGVETAEYSESYLQYLEDVKNGDTAKYNGVIPFPHEMEGTTLRKSSVAYNPMDLGLTTPAKNQGSLNTAWSFSGMSTLEAYLKLKGYGTYDLSEEHLRWWATGGKYGWNLDDMSGSSNVTAIGYLTAWAGPKLEKDIPYNLKSEAQGATKPSNMDTAPTQFNVTDVVRLNKDKETVKNAIMQYGSVTSGYAHYSTYFNKDETAYNCTNKRAPLNHAVAIVGWDDNYSKDNFASDVKPESNGAWLVKSSWGEFNSMKGFFWISYEDKTLLTDTDNYAMKSVSK---PDSDKKMYQLEYAGLSKIMSN----------KVTAANVFDFSRD----SEKLDSVMFETDSVGAKYEVYYAPVVNGVPQNNSMTKLASGTVSYSGYINVPTNSYSLPKGKGAIVVVIDNTANPNREKSTLAYETDIDGYYLYEAKANLGESYILQNNKFEDINTYSEFSPCNFVIKAITKTS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CI7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21932 for 2071 contacts (10.6/contact) +
2D Compatibility (PS) -31800 + (NN) -1201 + (LL) 836
1D Compatibility (HY) -10800 + (ID) 3400
Total energy: -24433.0 ( -11.80 by residue)
QMean score : 0.137
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