Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------------------MTLNAKGESNQILVDKEVHSTNLLLDIDEKPELFQGLLLSF-----QHVFAMFGATILVPLILGMPVSVALFASGCGTLIYQVATKFKVP------VYLGSSFAYITAMAL-----AMKQMHGDISAAQTGILF-VGLIYVVVATVIKFVGNSWVDKILPPIIIGPMIIVIG-----LGLANSAVTNAGFVAKGDWRKMLVAVVT------FLIAAFINTKGKGFIKIIPFLFAIIGGYILSIILGLVDLSPVEKAAWFELPKFYLPFKTGLFHSYKL---YFGP-------EMLAILPIS----IVTIAENIGDHTV---------LGQI--------------CGRNFLKKPGLNR---LLIGDGLATAFSALIGGPAETTYGENTGV--IGMTRIASVTVIRNAAFIAIAFSFFGK---FTALISTIPSAVLGGMAILLYGVIASNGLKVLIENRVNFAEVRNLIIASSMLVLGLGGAVLDLGALTLSGTALSAIVGIILNLILPKESMKS------ |
2J3L Chain:A ((1-565)) | MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRDEINSYKRLP----LNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLFIAD--EEPVMVLVRGDHDVNDVKLKNFLGADFLDEATEEDARRVLGAGFGSIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLTNVNPDRDFQPISYEDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDR----NERAGVKFADADLIGCP-IRITVGKKAVDGVVEVKIKRTGEMLEVRKEELESTLSILM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -332967 for 3213 contacts (-103.6/contact) +
2D Compatibility (PS) -45832 + (NN) 90 + (LL) 308
1D Compatibility (HY) -4800 + (ID) 3300
Total energy: -386501.0 ( -120.29 by residue)
QMean score : 0.219
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