Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNIYGDYGRYLPLILEDFSQRIQLENDKAKVETGYKLYEHIIGRIKTSDSMIEKCRRKQLPVTVDSALKAIRDSIGVRIICGFVNDIYQIVERIKSFDDCRIVVEKDYIQHVKPNGYRSYHVILEIDTPYPDCLGNSEGKYYIEIQLRTIAQDSWASLEHQMKYKHDIENPERIVRELKRCADEMASVDLTMQTIRQLIESGTKKE
1I8N Chain:A ((37-125))
--------------------------------------------------------------ETITAGNEDCWSKRPGWKL-----PDNLLTKTEFTSVDECRKMCEES---AVEPSCY-----ILQINTETNECYRNNEGDV------------TWSSLQY--------DQPNVVQWHLHACS------------------------
General information:
TITO was launched using:
RESULT:
Template:
1I8N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13518 for 599 contacts (-22.6/contact) +
2D Compatibility (PS) -9326 + (NN) -5393 + (LL) 10036
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -24201.0 ( -40.40 by residue)
QMean score : 0.092
(partial model without unconserved sides chains):
PDB file :
Tito_1I8N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I8N-query.scw
PDB file :
Tito_Scwrl_1I8N.pdb
: