Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQYSEIMIRYGELSTKKKNRMRFINKLKNNMEHVLSIYPDVSVKTDRDRGHVYLNGTDYHEVAESLKEIFGIQAFSPSFKVEKNVDTLVKAVQEIMTSVYKDGMTFKITAKRSDHSFELDSRALNHTLGDAVFSVLPNIKAQMKQPDINLKVEIRDEAAYISYENIRGAGGLPVGTSGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHFASPPYTSPGALKKAHDLTRKLTKFGGNIQFIEVPFTEIQEEIKE-KAPEAYLMTLTRRFMMRITDRIRENRN-GLVIINGESLGQVASQTLESMQAINA----VTATPIIRPVVTMDKLEIIDIAQKIDTFDIS--IQPFED-CC-TIFAPDRPKTNPKIKNTEQYEKRMDVEGLVERAVAGIMVTTIQPQADSDDVDDLIDDLL |
| 2YWB Chain:A ((209-410)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDHG-LLRLGEREEVEGALRAL---G--VNLLVVDAKERFLKALKGVEDPEEKRKIIGREFVAAFSQVARERGPFRFLAQGTLYPDVIE-----------GLPEDLEFELLEPFRLLFKDEVRELALLLGLPDTLRLRHPFPGPGLAVRVL--GEVTEERLEILRRADDIFTSLLREWGLYEKVAQALAVLTPVGYVLALRAVTTE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54249 for 1300 contacts (-41.7/contact) +
2D Compatibility (PS) -19299 + (NN) -11667 + (LL) 12852
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -77513.0 ( -59.63 by residue)
QMean score : 0.448
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