Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKRPIHLSHDFLAEVIDKEAITLDATMGNGNDTVFLAK---SSKKVYAFDIQEEAIAKTKAKLTEQG-ISNAELILDGHENLEQYVHTPLRAAIFNLGYLPSADKTVITKPHTTIKAIKNVLDILEVGGRLSLMVYYGHDGGKSEKDAVIAFVEQLPQNNFATMLYQPLNQVNTPPFLIMVEKLQSYENEV
3EEY Chain:I ((5-188))
-IKNSLGQSHDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPPILVCIEKI-------
General information:
TITO was launched using:
RESULT:
Template:
3EEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97493 for 1422 contacts (-68.6/contact) +
2D Compatibility (PS) -19001 + (NN) -2294 + (LL) 712
1D Compatibility (HY) -16800 + (ID) 3800
Total energy: -138676.0 ( -97.52 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3EEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EEY-query.scw
PDB file :
Tito_Scwrl_3EEY.pdb
: