Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNTWKKLLVSTAALSVVAGGAIAATHSNSVDAASKTTIKLWVPTDSKASYKAIVKKFEKENKGVTVKMIESNDSKAQENVKKDP--SKAADVFSLPHDQLGQLVESGVIQEIPEQYSKE-I--AKNDTKQSLTGAQYKGKTYAFPFGIESQVLYYNKTKLTADD----VKSYETITSKGKFGQ-Q-----LKAA---NSY-VTGPLFLSVGDTLFGKSGEDAKGTNWGNEAGVSVLKWIADQKKNDGFVNL---TAENTMSKFGDGSVHAFESGPWDYDAAKKAV----GEDKIGVAVYPTMKIGDKEVQQKAFLGVKLYAVNQAPAGSNTKRISASYKLAAYLTNAESQKIQFEKRHIVPANSSIQSSDSVQKDELAKAVIEMGSSDKYTTVMPKLSQMSTFWTESAAILSDTYSGKIKSSDYLKRLKQFDKDIAKTK |
| 3UOR Chain:A ((27-410)) | ------------------------------------KTTVRFWAMGKEAEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMQPYVARSKIVDPADYFPGVWDTNLVDGTLYGVPWYVDTRLLFYRKDLLREAGYSQMPKTWAEMEQVMAAIKRKVGPDRYAILMPLNEFEQQLSFALQQDDRLLRDHDN---YGNFRGAGFRKALGFYDNMYQQGWAPKVSETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGME-GNWGTAPLPGPNG-L-G---AGIAGGSSLVIFKSSQ-----HKDASWKLIEYLSQPQVQARFHAIIGDLPPRRSTWKLPSLANDALAHAFGDQ---LERVKATPKVLEWERIVQEMRLVTERVVRGGQSHDAAVQELDQRVDEILAKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64650 for 3054 contacts (-21.2/contact) +
2D Compatibility (PS) -38462 + (NN) -7756 + (LL) 2960
1D Compatibility (HY) -14800 + (ID) 3200
Total energy: -125908.0 ( -41.23 by residue)
QMean score : 0.352
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