Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKTKSFFGHPRGLSTLFFTEMWERFSYYGMRAILLYYMYYSVSQGGLGMDKTVAASIMAVYGSLVYLSSVIGGFVSDRILGSRKTVLYG---GILIMLGHIALATPFG-QTALFISIALIILGTGL----LKPNVSEMVGNLYGENDSRRDAGFSIFVFGINLGAFISPIVVGYLGQEVNFHLGFSLAAIGMFFGLLQYTLDGKKYLTEESLRPNDPLSPEEKSSLYKKVGLILIGIVIVLILLHLMHMLTIEVIIDIFSIIAIAIPIIYFIKILSSKKISSVERSRVWAYIPLFIASILFWSIEEQGSVVLALFADEQT---KLYLNFFGHHINFPSSYFQSMNPLFIMLYVPFFAWLWAKWGSKQPSSPKKFAYGLFFAGASFLWMMLPGLLFGVNAKVSPLWLTMSWAIVIVGEMLISPVGLSATSKLAPKAFQAQMMSI-WFLSNAAAQAINAQIVKLYTPD-TQILYYGVVGGITVVFGFILLFYVPRIEKLMSGVK |
| 2CFQ Chain:A ((7-398)) | -----------TNFWMFGLFFFFYFFIMGAYFPFFPIWLHDIN-----HISKSDTGIIFAAISLFSLLFQPLFGLLSDKL-GLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSR----RSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFF-AKTDAPSSATVAN-AVGAN-HSA--------------------------F-SL------------------K-LAL-ELFRQ----PKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQG----T----RVFGYVTTMGELLNASIMFFAPLIINRIGGK-----NALLLAGTIMSVRIIGSSFAT---------SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298990 for 3157 contacts (-94.7/contact) +
2D Compatibility (PS) -37909 + (NN) 3984 + (LL) 8160
1D Compatibility (HY) -20400 + (ID) 2400
Total energy: -347555.0 ( -110.09 by residue)
QMean score : 0.241
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