Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVGDKAKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKKNLIPLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNVSGKKVATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKPS-DAIFVEKSDKN-SKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDT--SADIPQW |
| 4IB2 Chain:B ((39-250)) | -------------------------------------------------------------QLEVTVFDDYVQPNEVVESGEFDANYFQHVPYLESFNEEKGTHLVDAGDIHYEPFGIYPGTKKSLDEISEGDKIAVPNDTTNEARALLLLQDNGIITLKDGAGLNATVNDIEENPYNVEIVELEAAQVARVTGETAYVVLNGNYALEAGYSVAKDALAYEKSDSEAAKTYVNIIAVKEGNEKEEK---IQALVKALKSDEIKEYIEKTYDGAVIPFE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21833 for 1628 contacts (-13.4/contact) +
2D Compatibility (PS) -21918 + (NN) -4457 + (LL) 5148
1D Compatibility (HY) -15600 + (ID) 3850
Total energy: -62510.0 ( -38.40 by residue)
QMean score : 0.365
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