Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTIVMQADKKLQEKIRTDLAQH-HISNNNPYVVFSAKISGTTVLLYTSGKLVFQGSNASHIAQKYGYIEQKESCSSETQDIPIIGTDEVGNGSYFGGLAVVASFVTPKDHAYLKKLGVGDSKTLTDQKIKQIAPLLEKAIPHKALLLSPQKYNQVVGPNNKHNAVSVKVALHNQAIFLLLQDGFEPEKIVIDAFTSSKNYQNYLKNEKNQFKQTITLEEKAENKYLAVAVSSIIARNLFLENLNKLSDDVGYKLPSGAGHQSDKVASQLLKAYGISSLEHCAKLHFANTKKAQALLK |
| 3VN5 Chain:A ((2-256)) | ---PSLKISPSEAEKIQNYLVSSGFRKINAPYTLWALEGNGVKVYYYKTGSLLIQGKNSEKVLKEVL---------NLLEKKKLPGCDESGKGDIFGSLVLCCVCIPEENYLKVSSLNPRDTKRLSDKRVERLYLALKPLVKAYCYEIKPEEYNKLYRKF--RNLNKMMTHFYKLLIERVKEE-CGVSEVVVDKYQPSNP-----------FGEDVIFETEAE-RNLAVAVASIFARYKFLQSLKEVERELGIKIPKGTSKEVKELAKSLKN------PERFIKLNFN---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109883 for 2033 contacts (-54.0/contact) +
2D Compatibility (PS) -27423 + (NN) -12375 + (LL) 2328
1D Compatibility (HY) -16800 + (ID) 3150
Total energy: -167303.0 ( -82.29 by residue)
QMean score : 0.505
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