Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLVGKEIIEFSAQAYHDGK-FITVTNEDVKGKWAVFCFYPADFSFVCPTELGDLQEQYETLKSLDVEVYSVSTDTHFVHKAWHDDSDVVGTITYPMIGDPSHLISQGFDVLGQD-GLAQRGTFIIDPDGVIQMMEINADGIGRDASTLIDKVRAAQYIRQHPGEVCPAKWKEGAETLTPSLDLVGKI
1WE0 Chain:F ((1-166))
-SLIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQYVRENPGEVC---------------------
General information:
TITO was launched using:
RESULT:
Template:
1WE0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86555 for 1281 contacts (-67.6/contact) +
2D Compatibility (PS) -18016 + (NN) -11748 + (LL) 1352
1D Compatibility (HY) -20800 + (ID) 5800
Total energy: -141567.0 ( -110.51 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_1WE0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WE0-query.scw
PDB file :
Tito_Scwrl_1WE0.pdb
: