Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIENYCQDYCLETIFPKHYFKDLQVITLTAGQSVCKQGEQLEYLHYIVKGRFKIVRRLFNGKEHILDIKTKPTLIGDIELLTNRQIVSSVIALEDLTVIQLSLKGRKEKLLTDATFLLKLSQELAQAFHDQNIKASTNLGYTVKELLASHILAIEEQ----G-----YFQLELSSLADSFGVSYRHLLRVIHDMVKEGLIQKEKPKYFIKNRFALESLNIQP
3E97 Chain:A ((17-224))
-----------VPEDAMREALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSL--RERVLGDIYAPGVVGETAVLAHQERSASVRALTPVRTLMLHREHFELILRRHPRVLWNLAEMLARRVTFLNDELIAFG-QNTEAALTHVFANLYRQRLAAGVPQPEVLPLGTQDIMARTSSSRETVSRVLKRLEAHNILEVSPRSVTLLDLAALEALS---
General information:
TITO was launched using:
RESULT:
Template:
3E97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89666 for 1403 contacts (-63.9/contact) +
2D Compatibility (PS) -21375 + (NN) -6896 + (LL) 460
1D Compatibility (HY) -6000 + (ID) 1750
Total energy: -125227.0 ( -89.26 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_3E97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E97-query.scw
PDB file :
Tito_Scwrl_3E97.pdb
: