Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSRKKDKLVLRLTTTLLVFGLGGVWFYNYKNDNVEPTVTSASDQTTTFIQTISPTAIEISKTYDLYASVLLAQAILESSSGQSDLSKAPNY-NLFGIKGEYKGKSVQMPTLEDDGK-GNMTQIQAPFRAYPNYSASLYDYAELVSSQ-K-----YASVWKSNTSSYKDATAAL-TGLYATDTAYASKLNQIIETYSLDAYDK
3FI7 Chain:A ((22-183))
-------------------------------------ALASTPTFQQTFINSISTQAMDLCKKYNLYPSVMIAQAALESNWGRSELGKA-PNYNLFGIKGSYNGKSVTMKTWEY-SDSKGWYQINANFAKYPSHKESLEDNAKKLRNGPSWDSSYYKGAWRENAKTYKD-ATAWLQGRYATDNTYASKLNTLISSYNLTQYD-
General information:
TITO was launched using:
RESULT:
Template:
3FI7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76059 for 1128 contacts (-67.4/contact) +
2D Compatibility (PS) -16245 + (NN) -210 + (LL) 2332
1D Compatibility (HY) -12400 + (ID) 3600
Total energy: -106182.0 ( -94.13 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3FI7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FI7-query.scw
PDB file :
Tito_Scwrl_3FI7.pdb
: