Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKILAACGAGVNSSHQIKDAIETQLGDRGYN-VHCDAVMVKDITEEMVNKYDIFTPIAKTDLGFN---VPIPVVEAGPILYRIPVMSEPVFTALEQVIKEHNLS
1VKR Chain:A ((377-471))VRKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQISVTNSAINNL---P-PDVDLVITHRDLTERAMRQVPQAQHISLTNFLDSGL--YTSLTERLVAAQRH----


General information:
TITO was launched using:
RESULT:

Template: 1VKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65058 for 642 contacts (-101.3/contact) +
2D Compatibility (PS) -9619 + (NN) 1319 + (LL) 964
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -74644.0 ( -116.27 by residue)
QMean score : 0.347

(partial model without unconserved sides chains):
PDB file : Tito_1VKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VKR-query.scw
PDB file : Tito_Scwrl_1VKR.pdb: