Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKCLTLNTHSWMEVNALKKLFDLAEHIFRE-KYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLN-LQG------LHYHWTWAYNHIGYSKYHEGVAILSLKPL-KPEDILVSAVDDETDYHTRRALVAETTLNDKVVTVVSLHLSWF-EKGFAEEWKRLETTLLE------VETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSEDLSISSSQ----VVFEGGEAPVVSDHYGLEITMDF |
| 2F1N Chain:A ((4-250)) | DFRVATWNLQGASATTESKWNINVRQLISGENAVDILAVQEAGSPPSTAVDTG-------------RVIPSPGIPVRELIWNLSTNSRPQQVYIYF--SA-VDALGGRVNLALVSNRRADEVFVLSPVR------QGGRPLLGIRI----GNDAFFTAHAIAMRNNDAPALVEEVYNFFRDSRDPVHQALNWMILGDFNREPADLEMNLTV--P--VRRASEIIS--PAAATQT----------SQRTLDYAVAGNSVAFRPSPLQAGIVYGARRTQISSDHFPVGVSRR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101937 for 1891 contacts (-53.9/contact) +
2D Compatibility (PS) -23929 + (NN) -668 + (LL) 1120
1D Compatibility (HY) -2000 + (ID) 1600
Total energy: -129014.0 ( -68.23 by residue)
QMean score : 0.342
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