Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRIWYLIIIITVILGGLAMKNLFATTEASSRKQEQDRVV-KYIKQHVE-LTNGDQIKKVEFIDFQKNEMTGTWGISTKINEQFSISFSEDRIGGKLRALGYQPNEIGFSK-DINS-NNQNVND-----IEV-I-YMKEE------ |
| 4GYM Chain:A ((7-149)) | QSRLTFVNLPVADVAASQAFFGTL--GFEFNPKFTDESCACMVVSEQAFVML-----IDRARFADFTSKPIADATA-TTEAIVCVSAI-DRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWMSAEAVDMAQPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9622 for 736 contacts (-13.1/contact) +
2D Compatibility (PS) -12653 + (NN) 624 + (LL) 456
1D Compatibility (HY) -800 + (ID) 800
Total energy: -22795.0 ( -30.97 by residue)
QMean score : 0.205
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