Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIMGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEESGNFGFDRLAELVKEYKVDKFVVGLPKNMNNTSGPRVEASQAYGDKITELFNLPVEYQDERLTTVQAERMLVEQADISRGKRKKVIDKLAAQLILQNYLDRMF |
1VHX Chain:A ((1-137)) | LRILGLDLGTKTLGVALSDEMGWTAQGIETIKINEAEGDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTMAAEKMLI-AADVSRQKRKKVIDKMAAVMILQGYLDSLN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VHX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15029 for 910 contacts (16.5/contact) +
2D Compatibility (PS) -13592 + (NN) 642 + (LL) 104
1D Compatibility (HY) 4000 + (ID) 1100
Total energy: 5083.0 ( 5.59 by residue)
QMean score : 0.175
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