Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIRVNATIITDVEALKADKDLNHFKDY-ATCETFVVDADN-HLKANEEISELLKGWDWWCIW-------STRPLSKKDNQVFTLYNDDLYNL-CR-
1VM0 Chain:A ((19-116))KKNRIQVS----NTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIMTSIVDIKPVQKAKIEITLVKSEKFDELMAAA


General information:
TITO was launched using:
RESULT:

Template: 1VM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 300 -30725 -102.42 -374.69
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -102.42
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_1VM0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VM0-query.scw
PDB file : Tito_Scwrl_1VM0.pdb: