Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANGNKQAGQRISPSLTLLLATACGIIVANLYYAQPLVGLISK----AIGLSPSGAGLIVTLTQIGYVAGLLFLVPLGDIIENKKLIVVSLLLSAAALTLTAFVKH-------GTLFLAAAFFVGLGS-IAAQVLVPFASYLASDAARGRVVGNVMSGLLLGIMLSRPISSLVAD--------------IWGWNAIFALSAVVSVILAIVLSKVLPARKPTANTNYTALLGSMWKLL---RTTPVLRRRAIYHA----FVFGAFSLFWTTVPLLLSGPDFHFSQKA---------IAL-Y-ALVGIAGAVTAPIGGRLADRGLTRLATGIALGVVVVSLLLPLMIQSSSPVGITVLVAAAILLDMGVSANLVLSQRAIFS-LAPEIRSRLNGLFMAIFFLGGAIGSSIGGWAYASGGWSTALWIGIAFPVIALLYFITEK
4J05 Chain:A ((54-494))---------------------------------INQVAPMLAQVYFPKTGLPAQRQDLMKAAANIGCVVGQVMFGVLGDSFGRKFVYGKELILIIVATIFQMSAPSHWDGNRVLTWITICRVFLGIGIGGDYPMSATVVSDRANIHRRGTLLCFIFANQGWGSFVGSLVTIVTISGFKHRLKSGHTHDVDKAWRILIGLSLIPAFGTLY-QR---------------------WQEFVAYFSTWNHFRNLLGSMLGWFLVDIAFYGINLNQSVVLAQ--IGFAGKTGDVYDKLFQLATGNIIVTALGFLPGYYFTLFLIDIVGRKKLQFMGFIMSGLFLAILAGEI-DHIGKGPLLACFTFMQFFFNFGANTTTFIVAAELFPTRIRASAHGISAAAGKCGAILSSLVFNQLKAKIGTSAVLWIFFSTCILG--------


General information:
TITO was launched using:
RESULT:

Template: 4J05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1565 -242785 -155.13 -737.95
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -155.13
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.299

(partial model without unconserved sides chains):
PDB file : Tito_4J05.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J05-query.scw
PDB file : Tito_Scwrl_4J05.pdb: