Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKRTIEQILDELRRGRRPLLADKPAESDASRYDCLRCKDQGGYLVRQNGLEVWTMCSCMAERKVKRLLGASEITHAFRQLGFKEFRTEGKPQAIKDAFECTKEYVADYEQIKDCRKNSIALLGQPGSGKTHLLTAAANELMRTCYVPVIYFP---FVEGFTDLKNDFALLEAKLNRMKQADVLFIDDLFKPVNGKPRATDWQLEQMYSVLNYRYLNHKPILLSSELTIEGLVRVDEALGTRIYEMCSDYLVIIKGAAYELNHRLEGVR
2HCB Chain:C ((21-160))-------------------------------------------------------------------------------------------------AYEVVKEALENLGSLY----NPIFIYGSVGTGKTHLLQAAGNEAKKRGY-RVIYSSADDFAQAMVEHLKKGTINEFR-NMYKSVDLLLLDDV-QFLSGKERT---QIE-FFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSR---------------------------


General information:
TITO was launched using:
RESULT:

Template: 2HCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 551 -74447 -135.11 -568.30
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain C : 0.67

3D Compatibility (PKB) : -135.11
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_2HCB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HCB-query.scw
PDB file : Tito_Scwrl_2HCB.pdb: