Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRNKRRNRQIVVAVNGGKAVKAIFLFIVSLIVIFVLSGVLTSLRPELRPSSDSFYGIAEELPGDVFAHLLQMENHYFASDLSQTDSSFHLSRLSLKLATSINLEDPRSFLGRELPGFAQFDTEILLAGQGTDYTNMPAESPPPSKVMEEEREANLAEIEKQQTQSDNAQKDPPKQTTGDKKVVFIYHTHNTESYLPLLKGETDPDMARHSKANVTLVGDMFGQALES-QGIGATVNKTDIQSKLNKKGLNYARSYDESRPVVKDALASNKNLQYIIDIHRDSRRKKDTTATIKGKSYARVAFVVGKKSKNFEENYKIASELHKLMEKKYPGLSTGVFSKGSPGDNGVYNQDLTDRALLLEFGGVDNNLEEL--------QRAANAAADVFSEMYWDAEKVNAASGETKKQ
4RN7 Chain:A ((32-186))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLQIAKKLANKLSKQKDIQVVVSRTDDTY----------ISLK-DR--AI--LANNSSADVLVSIHLNAEKNG---NTATGI---ET-WYR---NKATDGSKELAQTVQSTIVSYVKVRDRGIVENN----FEVLRES-NMPAILIECGFLTTPSEEQKIINEKYQDQLAEGIVQGVLSYLDSKG------------


General information:
TITO was launched using:
RESULT:

Template: 4RN7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 671 27348 40.76 187.31
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 40.76
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_4RN7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RN7-query.scw
PDB file : Tito_Scwrl_4RN7.pdb: