Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNYDHILIRFGEISTKGKNRKSFIERLKQNIRLVLKDYPNLKYFSNRDRMTITLNGEDPEALFPHLKQVFGIQSFSLAIKCDSRLDDIKATALKAIKDQYKPGDTFKVATKRAYKQFELDTNQMNAEIGGHILRNTEGLTVDVRNPDIPLRIEIREEATFLTIRDEKGAGGLPVGSAGKAMLMLSGGFDSPVAGFYAMK-RGLSVEAVHFFSPPYTSERAKQKVMDLAKCLSRFGGSM-TLHIVPFTKTQE-L-----IQKQ----IPENYTMTATRRLMLQIADRIREKRNGLAIITGESLGQVASQTLESMYAINA-VTSTPILRPLIA--MDKTEIIEKSREIGTYETSIQPFEDCCTIFTPPSPKTRPKKEKIEHFESFVDFEPYIQEAVDNIETMTLYSEQEANDKFAELF
4XFJ Chain:A ((10-177))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SERVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGG--EDMEVVRQRALDC-----GAVESIVIDARDEFANDYCVPAIQSNALYMDRYPLVSALSRPLIVKHLVKAAREHGGTIVAHGCTGKG-NDQVR-FEVGFASLAPDLEVLAPVRDYAWTREKAIAFAEENNIPIN-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4XFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 720 2535 3.52 16.78
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 3.52
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.595

(partial model without unconserved sides chains):
PDB file : Tito_4XFJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XFJ-query.scw
PDB file : Tito_Scwrl_4XFJ.pdb: