Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------MELIIILLALG--LLMFTAYRGFSVILFAPICALFAVLL--TDPSHVLP---FFSSIFMEKMAGFIKLYFPVFLLGAIFGKVVEMAGLAA-----SIAKTIVRLVGAKRAILA-------------------------IVLMGAVLTY---------------------SGVSLFVVVFAVYPFAKNMFQEANIPKR-----------LIPGTIALGA--------------------FTFTMDALPGTPQIQNVIPTSFFKTDIYA------APWLGLMGAVIVLAAGMLYLESRRKKAQASGEGYGGFDSQNAPAPESIESAA------EPDKSPIRHALAFVPL---ILVGAVNKYFTIYLPKWYPNGFDFSSIGLKEFGRLDISSAAAIWSVEIALVIGIITTILFDWRSV-FAQLKEGLNEGIGG----ALLASMNTGAEYGFGGIIAALPGFHKLSSGISHTFTDPLVNGAVTTTALAGITGSASGGMGIALSAMSEQYLQAIQAYNIPPEVMH--------RVIS------MASGGMDTLPHNGAVITLLAVTGLTHRQSYRDIFAITLIKT------AAVFAVIAIYS--------------------LTGLV------------------------------------------------
3WOL Chain:A ((1-696))GEGMWVPQQLPEIAGPLKKAGLKLSPQQISDLTGDPMGAVVALGGCTASFVSPNG--LVVTNHHCAYGAIQLNSTAENNLIKNGFNAPTTADEVSAGPNA---RVFVLDEITDVTKDAKAAIAAAGDDALARTKALEAFEKKLIADCEAEAGFRCRLYSFSGGNTYRLFKNLEIKDVRLAYAPPGSVGKFGGDIDNWMWPRHTGDFAFYRAYVGKDGKPAAFSKDNVPYQPKHWLKFADQPLGAGDFVMVAGYPGSTNRYALAAEFDNTAQWTYPTIARHYKNQIAMVEAAGKQNADIQVKYAATMAGWNNTSKNYDGQLEGFKRIDAAGQKLREEAAVLGWLKGQGAKGQPALDAHAKLLDLLEQSKATRDRDLTLALFNNTAMLGSATQLYRLSIEREKPNAERESGYQERDLPAIEGGLKQLERRYVAAMDRQLQEYWLNEYIKLPADQRVAAVDAWLGGNDAAAVKRALDRLAGTKLGSTEERLKWFAADRKAFEAS-NDPAIQYAVAVMPTLLKLEQERKTRAGENLAARPVYLQALADYKKSQGEFVYPDANLSLRITFGNVMGYAPKDGMEYTPFTTLEGVVAKETGQDPFDSPKALLDAVAAKRYGGLEDKRIGSVPVNYLSDLDITGGNSGSPVLDAHGKLVGLAFDGNWESVSSNWVFDPKMTRMIAVDGRYLRWIMQEVYPAPQLLKEMNV


General information:
TITO was launched using:
RESULT:

Template: 3WOL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1802 -29089 -16.14 -62.42
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -16.14
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.081

(partial model without unconserved sides chains):
PDB file : Tito_3WOL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WOL-query.scw
PDB file : Tito_Scwrl_3WOL.pdb: