Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGREYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQL--ALDNKVVAFGYSQSATIINNYINSLMAM---------G---SPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGA--TPANSPYPTHIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTLLSLMSGGLGNILHLIPPPVFT |
| 1G66 Chain:A ((2-193)) | -----------------------------------------------------------------------------------------------------------------------------------------CPAIHVFGARETTASPG-YGSSSTVVNG-VLSAYPGSTAEAINYPACGGQS--SCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPMFRAGLSYEVGTCA---AGGFD-QRPAGFSCPSAAKIKSYCDASDPYCCNGSN--------------AATHQGYGSE----------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60505 for 1562 contacts (-38.7/contact) +
2D Compatibility (PS) -18832 + (NN) -15583 + (LL) 18328
1D Compatibility (HY) 3200 + (ID) 1400
Total energy: -74792.0 ( -47.88 by residue)
QMean score : 0.412
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