Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAISCSPRPRYASRMPVLSKTVEVTADAASIMAIVADIERYPEWNEGVKGAWVLARYDDGRPSQVRLDTAVQGIEGTYIHAVYYPGE-NQIQTVMQQG-ELFAKQEQLFSVVATG-AASLLTVDMDVQVTMPV----P---------EPMVKMLLNNVLEHLAENLKQRAEQLAAS
3TFZ Chain:A ((3-162))
--------------HMRHVEHTVTVAAPADLVWEVLADVLGYADIFPPTEKVEILEEGQG--YQVVRLHVDVAGEINTWTSRRDLDPARRVIAYRQLETAPIVGHMSGEWRAFTLDAERTQLVLTHDFVTRAAGDDGLVAGKLTPDEAREMLEAVVERNSVADLNAVLGEAERRVR-
General information:
TITO was launched using:
RESULT:
Template:
3TFZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68249 for 1043 contacts (-65.4/contact) +
2D Compatibility (PS) -15994 + (NN) -7368 + (LL) 636
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -95675.0 ( -91.73 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_3TFZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TFZ-query.scw
PDB file :
Tito_Scwrl_3TFZ.pdb
: