Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK |
3B8L Chain:A ((106-148)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------TASMRAYVIGMGVGKDGRAVTVNGRYFFEVRRTEKGWKATRYT---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14687 for 189 contacts (-77.7/contact) +
2D Compatibility (PS) -4643 + (NN) -2541 + (LL) 11724
1D Compatibility (HY) 0 + (ID) 300
Total energy: -10447.0 ( -55.28 by residue)
QMean score : 0.368
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