Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPVNVISVAVVASDPLTRDGALARLSSHRELDVRAWQAGCETSVLLVLATTITAPLLCQIEDVQKDGPSHAPKLVVVADEFSAEQVFRMIKLGLTGLLYRSQSTFDCIVETIRLSAEGRLRLPERVQRYLVGRIKSTPTAEPDTPCAAALAEREVAVLRLLADGLSTHQVAVQLNYCERTIKNIVHDIVTRLKLRNRTHAVAHALRAGLI
4WUH Chain:B ((7-66))
------------------------------------------------------------------------------------------------------------------------------------------------------LTNREHEILMLIAQGKSNQEIADELFITLKTVKTHVSNILAKLDVDNRTQAAIYAFQHGL-
General information:
TITO was launched using:
RESULT:
Template:
4WUH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51035 for 398 contacts (-128.2/contact) +
2D Compatibility (PS) -6533 + (NN) -3933 + (LL) 12008
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -54593.0 ( -137.17 by residue)
QMean score : 0.771
(partial model without unconserved sides chains):
PDB file :
Tito_4WUH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WUH-query.scw
PDB file :
Tito_Scwrl_4WUH.pdb
: