Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADVPLDAQERLELCDLLEELGPAVATLIEGWTAHDLAAHIVLRERDLVAGLCIVLPGPFQRFAERRRARLAQSKDFTWLVARIRSGPPMGFFRIGWVRTLANLNEFFVHHEDVRRASGRGPRSLTPEMDAALWRNVRRGSHFLSRRLHGCGLEIEWVGTGKRVRVRSGEPTARLTGPPGELLLYVFGRRAVA------RVEVSGPLEAIAAVHRTHFGM |
1C44 Chain:A ((68-114)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------KADCTITMADSDLLALMTGKMNPQSAFFQGKLKITGNMGLAMKLQNL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C44.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14979 for 213 contacts (-70.3/contact) +
2D Compatibility (PS) -4509 + (NN) -3067 + (LL) 12528
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -12277.0 ( -57.64 by residue)
QMean score : 0.416
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