Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIADVLRNKGAAVVTINPDATVGELLAGLAEQNIGAMVVVGAEGVV-GIVSERDVVRQLHTYGASVLSRPVAKIMSTTVATCTKSDTVDKISVLMTENRVRHVPVLDGKKLIGIVSIGDVVKSRMGELEAEQQQLQSYITQG
3FHM Chain:C ((26-149))
--VKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARI-----------------
General information:
TITO was launched using:
RESULT:
Template:
3FHM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93417 for 858 contacts (-108.9/contact) +
2D Compatibility (PS) -13468 + (NN) -7028 + (LL) 1692
1D Compatibility (HY) -10800 + (ID) 2750
Total energy: -125771.0 ( -146.59 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_3FHM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FHM-query.scw
PDB file :
Tito_Scwrl_3FHM.pdb
: