Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHSEDQR--PNDLIYGLDDRPRPLPA-FLAALQHVLASFVGIVTPPLVIGSLLGLGEHLPYLISMALMVSGAGTLIQARRPFGIGA---GMICLQGTSFAFLGAVLAAGMLVKQRGGGPEEILAMIFGVCFFGAFVQIVLSRFLGHLRRVITPLVTGIVITLIGVSLIKVGITDLGGGAGATDFGAPANLALGALVLLSIVLLNRSRLPWLRLAAIVIGLALGTLAAWATGLFVPRALPELP----LVSLPQPFRFGFAFDWMAFLPVALIYLISSIETVGDLTANCMLSRQPLEGPAYLQRLRGGVLGDGVSCLLAATFSAFPNTTFAQNNGVIQLTGVASRHVGIYIGGVLLALGLFPWVGAILQQIPKPVLGGATLVMFGSVAAAGIRILGQTAMDRR-SVLIIAASFGVGLGVA-AQPTLLDQMPAVVKTLFDSAITSGGIT--AILLNLLLPEERVAEAAQASAKGGALARWRKPLG |
| 4QLA Chain:A ((19-442)) | -LDLEEWWGPPELKQKQDTSIKPFEITFSETMVKELKERIKKRRPFAPPLEGVGFKYGFNSKQLDSWLKYWAEEYPFAERQKFLNQYPHFKTNIQGLNIHFMRI--------TPKVPKGVEIVPLLLLHGWPGSVRE--FYEAIPHLTAV--SKDRNFALEIIAPSLP---------GYGFSDAAVRPGLAAAEVAVIFKNLMARLGYK----QYYVQGGDWGALIGSAMATFFPKEIIGFHSNMALTLSPAATFLEFVGALFPSLIVEP-ELANRLYPLSEKYSTLLEELGYMHIQATKPDTVGIGLTDSPAGLLAYILEKFSTWTNPDLRS--KEDGGLS----------------YRWT-------KDQLIDNLMLYWSTKSIVTSMRLYAESFSSRHFDLKLDEIQVQVPTWVLQAKHELAYQPPCILKMKYPKLVNASVIEDGGHFLAFELPEIFAKDVLKAIGEFRKLKN------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -340010 for 3317 contacts (-102.5/contact) +
2D Compatibility (PS) -41866 + (NN) 1170 + (LL) 5392
1D Compatibility (HY) -7600 + (ID) 3600
Total energy: -386514.0 ( -116.53 by residue)
QMean score : 0.217
|
|
|