Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAPLRIALIGAGNMGRQHYHRLQRIAGARLCAVADPQG---QAFAADTGVPWFGDHRRLLEEARPQAAIVANPNNLHVATALDCLAAGVPLLLEKPVGVQLDEVSELVAVARRSGVPLLVGHHRRHNPLVVRARQLIAEGALGRLLSVTALWQLKKPDSYFEVAWRRE---PGAGMLLTNLIHDLDLLRHLCGEVREVQALAGNAIRGLPNEDNIALLLRFANGALGSLTGCDAAAAPWSWELAAGENPVYPRQAEQPCYLLAGTEGALSLPQLRRWRYA-----EARQGWHDP---LAAS------EEAVATGDPLQRQLEHFVRVARGEEAPLMDATDAARTLALVEAVREAARSGRACAPASF |
| 3DB2 Chain:A ((2-352)) | MYNPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEIGEVSSIEAVFSNERGLELKKGNWRGEPATAPGGPLTQLGVHQIDNLQFLLGPVARVFNFGKPMYTEVENITVNQTLLEFEDGKQAYLGTNWACPG-------------------VFSINVYGTKANLFYQLDFSWWSNSDVTDEHSTLIKREFAS---NRILRDVKVDFESVDHLRVEVEEVADVIRNGGETEIGAEASLRNLAVVLAAVKSVHEKRPVEIAEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196985 for 2863 contacts (-68.8/contact) +
2D Compatibility (PS) -34468 + (NN) -7808 + (LL) 1500
1D Compatibility (HY) -14800 + (ID) 3500
Total energy: -256061.0 ( -89.44 by residue)
QMean score : 0.429
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