Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESRILSLAALTVLELSPPDMVEAAARAGYSHVGLRLVPATVE---EHHYPLLADAGLRRRTLARLRDSGVRTLDVEILRLRPDTRVGEFAAVLEVGAEFGARYVLVAGNDDDERRSADNFAALCDLARPLGLDPHLEFMPWTG-IRDLRQAARVVEAAARDNAGLLLDAFHFDRSASSLEDLRAIPPARLGYAQLCDVVGPRPTSMDEILRQAREERRFPGDGGLDLLALLRALPE---NLPLSLEVPALDLLARGVDGAERARLAIERTRALLARL |
| 3P6L Chain:A ((7-261)) | KNGWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYV---AEKSSDWEKMFKFAKAMDLEFITCEPAL-------SDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAISG-RSQSLGSCSDVGHWRREGLNQIDCLKQLKGRIISLHFKDIAPKKAG-------ENEQHDVIWGTGILDVKGMLKELKSQNFKGVFSIEYEYNW-----ENSVPDIKECIQYFNKTANEI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3P6L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126115 for 2083 contacts (-60.5/contact) +
2D Compatibility (PS) -27152 + (NN) -12706 + (LL) 1660
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -170663.0 ( -81.93 by residue)
QMean score : 0.476
|
|
|