Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVIIVTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
1W25 Chain:B ((2-118))
-ARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRF
General information:
TITO was launched using:
RESULT:
Template:
1W25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44937 for 920 contacts (-48.8/contact) +
2D Compatibility (PS) -12982 + (NN) -9470 + (LL) 208
1D Compatibility (HY) -11600 + (ID) 2200
Total energy: -80981.0 ( -88.02 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_1W25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W25-query.scw
PDB file :
Tito_Scwrl_1W25.pdb
: