Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQPTPSDTDQQQALEAFLRDGGTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVTARKDRAYESDNA
2XCB Chain:B ((7-138))
------------------------LAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVTA-----------
General information:
TITO was launched using:
RESULT:
Template:
2XCB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62399 for 1010 contacts (-61.8/contact) +
2D Compatibility (PS) -14655 + (NN) -7432 + (LL) 1348
1D Compatibility (HY) -18000 + (ID) 6600
Total energy: -107738.0 ( -106.67 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2XCB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XCB-query.scw
PDB file :
Tito_Scwrl_2XCB.pdb
: