Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMGVNANISESLTGTIEAPFPEFEAPPANPMEVLRNWLERARRYGVREPRALALATVDGQGRPSTRIVVIAELGERGVVFATHADSQKGRELAQNPWASGVLYWRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARRLAETDGPLPRPPGYCLFELCLESVEFWGNGTERLHERLRYDRDEGGWKHRYLQP
4HMV Chain:B ((20-225))
---------ESLTGTLDAPFPEYQTLPADPMSVLHNWLERARRVGIREPRALALATADSQGRPSTRIVVISEISDAGVVFSTHAGSQKGRELLHNPWASGVLYWRETSQQIILNGQAVRLPNAKADDAWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLAELQGPLPRPEGYCVFELRLESLEFWGNGQERLHERLRYDRSDTGWNVRRLQP
General information:
TITO was launched using:
RESULT:
Template:
4HMV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55379 for 1489 contacts (-37.2/contact) +
2D Compatibility (PS) -22396 + (NN) -14965 + (LL) 596
1D Compatibility (HY) -20000 + (ID) 7550
Total energy: -119694.0 ( -80.39 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_4HMV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HMV-query.scw
PDB file :
Tito_Scwrl_4HMV.pdb
: