Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSYDSIFRPGLFDGQTIIVTGGGSGIGRCTAHELAALGAHVVLVGRKAEKLEKTAGEIVED-----GGSVSWHACDIREEEAVKTLVANILAERGTIHHLVNNAGGQYPSPLASISQKGFETVLRTNLVGGFLVAREVFNQSMSKTGGSIVNMLADMWGGMPGMGHSGAARSGMENFTRTAAVEWGHAGVRVNAVAPGWIASS--GMDTYEGAFKAVIPTLREHVPLKRIGSESEVAAAIVFLLSPGAAFVSGNTIRIDGAASQGSRAFPLFKGKPGQSRAYNGFHRAYLPDVLKDQED
1YXM Chain:B ((9-272))----SYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTA-QSFFEGSF--------QKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSY------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1YXM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169728 for 2139 contacts (-79.3/contact) +
2D Compatibility (PS) -26964 + (NN) -9015 + (LL) 1780
1D Compatibility (HY) -20800 + (ID) 5500
Total energy: -230227.0 ( -107.63 by residue)
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_1YXM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YXM-query.scw
PDB file : Tito_Scwrl_1YXM.pdb: