Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYDSIFRPGLFDGQTIIVTGGGSGIGRCTAHELAALGAHVVLVGRKAEKLEKTAGEIVED-----GGSVSWHACDIREEEAVKTLVANILAERGTIHHLVNNAGGQYPSPLASISQKGFETVLRTNLVGGFLVAREVFNQSMSKTGGSIVNMLADMWGGMPGMGHSGAARSGMENFTRTAAVEWGHAGVRVNAVAPGWIASS--GMDTYEGAFKAVIPTLREHVPLKRIGSESEVAAAIVFLLSPGAAFVSGNTIRIDGAASQGSRAFPLFKGKPGQSRAYNGFHRAYLPDVLKDQED |
1YXM Chain:B ((9-272)) | ----SYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTA-QSFFEGSF--------QKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSY------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YXM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169728 for 2139 contacts (-79.3/contact) +
2D Compatibility (PS) -26964 + (NN) -9015 + (LL) 1780
1D Compatibility (HY) -20800 + (ID) 5500
Total energy: -230227.0 ( -107.63 by residue)
QMean score : 0.553
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